Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934058.1_cds_XP_016480208.1_71673
CDS Infomation

[gene=LOC107801392] [db_xref=GeneID:107801392] [protein=protein SCARECROW-like] [protein_id=XP_016480208.1] [location=complement(4997..6529)] [gbkey=CDS]
Sequence

ATGTTGAAAGGAGGGTCTGAAGTAATTCATCAAAATGGTGCTCTTGATCATATTATACAA
CAATCCAATGAACAATGGGATTGTGCTAGTCTTGTTGGTTTTCCTGGAATTACCTCTGCC
CCTAATTATCCCTCTAAGCCAGTCACCGAAAATCGCGGCAATAATCCTGAAAGAAATGAA
CTTTCCCAGTGGGTTGAGCATGTGACAAGGCAACTTATTGAAGATTTGCCAGAAAATGAA
ACCCAAGCCATGACATATCAGGACAACATTGTCCCTACACTATTGGGAGAGTTGAGGCCT
AAAAAAGTTGCGCGAAGAAACTCTTCTGAGAACCTTGGACAACAACATCAATGGAACTCT
CATGATCTCGCGAGAGATAAAAATAATACGAACATAAATGAGACGGGAGCTAAAGGAATG
AATAGGCTAGATGATCAAGGATTAAACTTGAGAACTCATCTTTTGGAATGTGCAGTTGCT
ATATCAGTAGATAACTTGGGAGAAGCTCATAGAATGTTGCTTGAGCTAACACAAATGGCA
TCCCCCTATGGACAATCTTGTGCTGAAAGAGTAGTGGCTTATTTTGCAAAAGCAATGGCT
AGTAGAGTCATCAATTCATGGCTAGGAATATGTTCTCCTTTGATCAATTACAAGAGTATC
CATTGTGCATTTCAAGTATTTAACAACATCTCACCATTCATAAAATTTGCACATTTCACA
TCCAACCAAGCAATTCTTGAAGCATTCCATCGTCGAGACAGAGTCCATATCATCGACGTG
GATATCATGCAAGGCCTACAATGGCCGGCTCTATTTCATATCCTCGCCACTCGGATAGAA
GGTCCTCCACATGTTACAATGACAGGAATGGGGACATCAATGGAACTATTGATTGAGACA
GGGAAACAACTTTCCAGTTTCGCCAAACGCCTTGGCATGTCCTTTGAGTTCCATCCAATT
GGGAAGAAAATAGGGGAGCTTGATATAACCATGTTGCAAATTAGGAGAGGAGAGGCTATA
GCCATACATTGGCTACAACATTCCTTGTATGATGCCACTGGCCCTGATTGGAAAACAATG
AGACTTCTCCACGAACTATCGCCAAGAGTTATCACACTAGTAGAACAAGAAATACCACTA
GGGGGTAGTTTCTTGGATCGATTCGTGGGATCCCTCCATTACTACTCCACAATATTCGAC
TCATTGGGAGCTTTCTTGCAAAGTGATGATTCGAGCAGGCATAGTGTTGAACATGGCCTG
CTTTACAGAGAAATCAACAACATATTAGCCATTGGAGGGCCAGCAAGAAATGGGGAGGAT
AAATTTAAGCATTGGAGAAGTGAACTATCAAGAAATGGATTCATGCAAGTGCCAATGAGT
ACAAATGCAATGGCTCAAGCTCAATTGATATTGAATATGTTCCCACCAGTTCATGGTTAT
AGCTTAGTGCAAGGTGATGGGACATTAAAGTTAGGGTGGAAGGATACTAGTTTGTATACT
GCATCTGCATGGACTTCTCCAAATTCTAGATAG

Peptide Sequence

PEP ID

XP_016480208.1
PEP Infomation

PREDICTED: protein SCARECROW-like [Nicotiana tabacum]
Sequence

MLKGGSEVIHQNGALDHIIQQSNEQWDCASLVGFPGITSAPNYPSKPVTENRGNNPERNE
LSQWVEHVTRQLIEDLPENETQAMTYQDNIVPTLLGELRPKKVARRNSSENLGQQHQWNS
HDLARDKNNTNINETGAKGMNRLDDQGLNLRTHLLECAVAISVDNLGEAHRMLLELTQMA
SPYGQSCAERVVAYFAKAMASRVINSWLGICSPLINYKSIHCAFQVFNNISPFIKFAHFT
SNQAILEAFHRRDRVHIIDVDIMQGLQWPALFHILATRIEGPPHVTMTGMGTSMELLIET
GKQLSSFAKRLGMSFEFHPIGKKIGELDITMLQIRRGEAIAIHWLQHSLYDATGPDWKTM
RLLHELSPRVITLVEQEIPLGGSFLDRFVGSLHYYSTIFDSLGAFLQSDDSSRHSVEHGL
LYREINNILAIGGPARNGEDKFKHWRSELSRNGFMQVPMSTNAMAQAQLILNMFPPVHGY
SLVQGDGTLKLGWKDTSLYTASAWTSPNSR

Transcript Sequence

Gene sequence data has not been registered.